Biological Small-Angle Neutron Scattering Workshop
Day 1: September 7, 2022
Teams Link: Click here to join the meeting
|
Schedule (EST) |
Activity |
Lead |
|
09:00–09:15 am |
Introductions |
Hugh O’Neill/ Wellington Leite |
|
09:15–09:30 am |
Center for Structural Molecular Biology Overview |
Hugh O’Neill |
|
09:30–10:15 am |
Introduction to Small-Angle Neutron Scattering |
Volker Urban |
|
10:15–10:25 am |
Virtual tour of Bio-SANS |
Luke Heroux |
|
10:25–10:40 am |
Bio-SANS Sample Environments |
Luke Heroux |
|
10:40–11:00 am |
Break |
|
|
11:00–11:30 am |
Bio-deuteration |
Kevin Weiss |
|
11:30–12:00 pm |
Virtual tour of Biology Laboratories |
Kevin Weiss/Qiu |
|
12:00–1:00 pm |
Lunch |
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1:00–1:45 pm |
Sample Preparation and Experiment Planning |
Wellington Leite /Manjula Senanayake Mudiyanselage |
|
1:4–2:30 pm |
Experiment Set-up and Data Acquisition |
Sai Venkatesh Pingali |
|
2:30–2:45 pm |
Break |
|
|
2:45–04:00 pm |
Attendee Lightning Talks |
Wellington Leite |
Day 2: September 8, 2022
Session 1 Teams Link: Click here to join the meeting
Session 2 Teams Link: Click here to join the meeting
|
Schedule (EST) |
Activity |
Lead |
|
09:00–09:45 am |
Breakout Session 1: Data analysis for solution scattering of biomacromolecular complexes Breakout Session 2: Data analysis for hierarchical biosystems |
Wellington Leite
Sai Venkatesh Pingali |
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09:45–10:00 am |
Break |
|
|
10:00–12:00 pm |
Hands-on Session 1 Hands-on Session 2 |
Wellington Leite Sai Venkatesh Pingali |
Software required for Session 1
|
Software |
Source |
Application |
|
EMBL |
Program suite for small-angle scattering data analysis from biological macromolecules - https://www.embl-hamburg.de/biosaxs/software.html |
|
|
BioXTAS |
Program for analysis of Small-Angle X-ray Scattering (SAXS) data - https://bioxtas-raw.readthedocs.io/en/latest/api.html |
|
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Schrödinger |
Molecular visualization system - https://pymol.org/2/ |
|
|
UCSF |
Interactive visualization and analysis of molecular structures - https://www.cgl.ucsf.edu/chimera/ |
Software required for Session 2
|
Software |
Source |
Application |
|
Irena |
Igor Pro* |
Irena package for analysis of small-angle scattering data |
|
SASView 5+ |
SASView for small-angle scattering analysis - https://www.sasview.org |
A free demonstration version of Igor Pro is available at [https://www.wavemetrics.com/downloads/current/Igor%20Pro%209]]. This should be installed prior to installing the Irena package.
